Symphonia capture
Preface
Introduction
1 Scotti et al. (in prep) scaffolds preparation
2 Olsson et al. (2017) scaffolds preparation
3 Tysklind et al (in prep) transcript preparation
4 Neutral region selection
5 Fuctional region selection
6 Baits
- 6.1 First design
7 Plates
- 7.1 Extraction
- 7.2 Library plates design
8 Libraries preparation protocol
9 Libraries preparation results
10 Capture
11 Quality Check
12 Mapping
13 Variant call
14 Variant filtering
15 Population structure
16 Annotation
17 Population history
18 Population genomics
- 18.1 Linkage desequilibrium & Minor alleles frequency
- 18.2 Genepool-specifc SNPs
19 Growth & Animal models
20 Environmental genomics
21 Functional genomics
- 21.1 Genotype
22 Growth genomics
23 Introgressions
24 Species dynamics
25 Forest gap dynamics
- 25.1 NCI-niche breadth
- 25.2 BA before treefalls
References
Published with bookdown

Symcapture

Symcapture

Symphonia globulifera gene capture

Sylvain Schmitt

2020-07-22

Preface

stability-wip

Gene capture of Symphonia globulifera individuals from Paracou.

Have a nice reading.

Sylvain